Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015789190.1_cds_XP_016495183.1_893
CDS Infomation

[gene=LOC107814290] [db_xref=GeneID:107814290] [protein=probable mitochondrial-processing peptidase subunit beta, mitochondrial isoform X3] [protein_id=XP_016495183.1] [location=join(49718..50389,52658..52822,53211..53348,53436..53587,53857..53965,57963..58061,58209..58274,60578..60685,64118..64120)] [gbkey=CDS]
Sequence

ATGGCCACGCGCCACCTTCTCAACGTCACGCGCCGCTCTCGAATCAATCGTTTTTCCCTT
CCACCACCATGTCTAACACTCTCTTCCCGATCCACCACCTCCGTAACCACCTCACCACCC
TCCTCCCCACCTTCCCCACCTCCCCCAGACTTCATGATCTACGATCGCTTAGCTGAACAA
GTCAAATCAAAGATCAAACGCCTCGAAGAACCTAACCCTAAGTTCCTCCAGTACAATTCC
CCGCATCCTACCGCAGCGGATCACACCTCAATTCTCTCATCACCGGAGACTAAAATCACC
ACTCTCCCTAACGGCCTACGTGTCGCTACTGAATCGAACCTGTCATCCTCAACGGCTACT
GTCGGAGTTTGGATCGACGCCGGATCTCGATTCGAAACGGAGGAGAATAACGGCGTCGCG
CATTTCCTTGAGCATATGATTTTTAAGGGAACGGAGAAACGGCCAATTAGGGCATTGGAA
GAGGAAATTGAGAATATGGGAGGGCATTTGAATGCGTATACTTCTAGGGAACAGACGACG
TATTTCGCTAAGGTTTTGGGATCTGATGTGCCAAAGGCGATTGATATACTTGGGGATATT
TTACAGAATTCGCTTTTGGAGGAAGATAAGATTGTTCGGGAGCGTAGTGTGATTCTTCGG
GAAATGGAAGAGGTGGAAAAACAACCCGAGGAAGTCATCTTTGACCAGTTACATACTACT
GCATTCCAGTACACTCCATTGGGTAGAACTATTCTTGGACCTGCCCAGAACATTGAGAAA
ATGACAAGAGCTCATATTCAAGATTACATTTCAACCCACTATGGTGCTCATAGAATGGTA
ATTTCTGCTGCTGGAGCTGTGAAGCATGAAGATGTCGTTGAGCTAGTGAAGAAACATTTT
ACAAAACTATCATCTAATCCTATTACCACTTCCCAATTGGTGGCAGATGAGCCAGCAATA
TTTACAGGCTCAGAGATACGTATCATTGACGATGATCTGCCTCTTGCTCAATTCGCTGTT
GCATTTAGTGGAGCATCATGGACAGACCCTGATTCCATAGCTTTGATGGTCATGCAACAA
ATGTTGGGATCATGGAACAAAACTTCAGGAGGCGGGAAGCACATGGGTTCAGAGCTTGTC
CAAAGGGTGGCCATTAATGAAATAGCTGAGAGTGTGATGGCATTTAACACCAACTATAAA
GACACAGGGCTGTTTGGTGTCTATGCTGAAGCCAAGCCGGATTGCTTGAGTGACTTAGCT
TATGTCATCATGCAAGGGATATGCAAGTTATGTTACAGAGTGTCAGAAGCTGATGTCGTT
CGCGCACGTAATCAGCTCAAATCTTCTTTGATGCTCCACATTGATGGATCGGGCCCTACT
GCTGAAGACATTGGACGGCAGTTAATCACGTATGGCCGCAGAATTCCATATGCTGAGTTA
TTTTCCAGAATTGACAGGGTCGATGCTGACACTGTCAAGCGAGTTGCAAATCGCTTTATT
TTCGACAGGTAG

Peptide Sequence

PEP ID

XP_016495183.1
PEP Infomation

PREDICTED: probable mitochondrial-processing peptidase subunit beta, mitochondrial isoform X3 [Nicotiana tabacum]
Sequence

MATRHLLNVTRRSRINRFSLPPPCLTLSSRSTTSVTTSPPSSPPSPPPPDFMIYDRLAEQ
VKSKIKRLEEPNPKFLQYNSPHPTAADHTSILSSPETKITTLPNGLRVATESNLSSSTAT
VGVWIDAGSRFETEENNGVAHFLEHMIFKGTEKRPIRALEEEIENMGGHLNAYTSREQTT
YFAKVLGSDVPKAIDILGDILQNSLLEEDKIVRERSVILREMEEVEKQPEEVIFDQLHTT
AFQYTPLGRTILGPAQNIEKMTRAHIQDYISTHYGAHRMVISAAGAVKHEDVVELVKKHF
TKLSSNPITTSQLVADEPAIFTGSEIRIIDDDLPLAQFAVAFSGASWTDPDSIALMVMQQ
MLGSWNKTSGGGKHMGSELVQRVAINEIAESVMAFNTNYKDTGLFGVYAEAKPDCLSDLA
YVIMQGICKLCYRVSEADVVRARNQLKSSLMLHIDGSGPTAEDIGRQLITYGRRIPYAEL
FSRIDRVDADTVKRVANRFIFDR

Transcript Sequence

Gene sequence data has not been registered.